Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AC023511.2-201ENST00000618803 211 ntBASIC14.2□□□□□ -0.14
IFT52Q9Y366 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AC007787.1-201ENST00000588095 1583 ntBASIC14.2□□□□□ -0.14
IFT52Q9Y366 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.2□□□□□ -0.14
IFT52Q9Y366 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IFT52Q9Y366 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
IFT52Q9Y366 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AC009477.1-201ENST00000452936 217 ntBASIC14.19□□□□□ -0.14
IFT52Q9Y366 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
IFT52Q9Y366 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
IFT52Q9Y366 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
IFT52Q9Y366 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
IFT52Q9Y366 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms