Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AC011474.4-201ENST00000623523 2076 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 IGHV3-22-201ENST00000520721 359 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 KRT8P23-201ENST00000560090 1207 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AP000842.3-202ENST00000569238 1080 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AL049840.3-201ENST00000602669 611 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AC064836.3-201ENST00000607928 673 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 MIR7706-201ENST00000613747 67 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 CICP8-201ENST00000455800 2813 ntBASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KCNIP3Q9Y2W7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 COL6A4P2-202ENST00000504443 2753 ntBASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms