Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 AC104109.2-201ENST00000602919 1418 ntBASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRCH1Q9Y2L9 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 MIR574-201ENST00000385209 96 ntBASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ELK2BP-201ENST00000415014 1224 ntBASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 AL591424.1-201ENST00000442569 1213 ntBASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 MIR497HG-202ENST00000572453 3838 ntBASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRCH1Q9Y2L9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 RNU1-129P-201ENST00000384064 167 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 UNC93B6-202ENST00000528242 690 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 MIR3909-201ENST00000579518 119 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 U1.21-201ENST00000580816 167 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 AC027601.4-201ENST00000611259 610 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 AL691432.1-201ENST00000596308 1422 ntBASIC14.39□□□□□ -0.11
LRCH1Q9Y2L9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms