Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 ACE3P-201ENST00000423435 1973 ntBASIC15.29■□□□□ 0.04
HACD3Q9P035 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HACD3Q9P035 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 RNU1-114P-201ENST00000365297 166 ntBASIC15.29■□□□□ 0.04
HACD3Q9P035 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.29■□□□□ 0.04
HACD3Q9P035 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.29■□□□□ 0.04
HACD3Q9P035 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.29■□□□□ 0.04
HACD3Q9P035 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HACD3Q9P035 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
HACD3Q9P035 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HACD3Q9P035 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 AC106881.1-201ENST00000605849 3329 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HACD3Q9P035 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HACD3Q9P035 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HACD3Q9P035 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HACD3Q9P035 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.28■□□□□ 0.04
HACD3Q9P035 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HACD3Q9P035 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.28■□□□□ 0.04
HACD3Q9P035 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.28■□□□□ 0.04
HACD3Q9P035 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 KLF2P2-201ENST00000416807 1039 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 ACTG1P3-201ENST00000431775 1114 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 RN7SL752P-201ENST00000463779 287 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 RN7SL692P-201ENST00000464677 288 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 AC022137.2-201ENST00000503482 481 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.28■□□□□ 0.04
HACD3Q9P035 AC022616.1-201ENST00000518688 554 ntBASIC15.28■□□□□ 0.04
HACD3Q9P035 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HACD3Q9P035 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
HACD3Q9P035 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HACD3Q9P035 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HACD3Q9P035 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms