Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 AC232323.1-201ENST00000540724 2099 ntBASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.32■□□□□ 0.68
SMC4Q9NTJ3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 AC140479.7-201ENST00000636301 2332 ntBASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 AC092933.1-201ENST00000393644 945 ntBASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 BTNL10-201ENST00000595971 695 ntBASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMC4Q9NTJ3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 MYO15B-237ENST00000642007 4893 ntBASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AC245100.3-201ENST00000441281 285 ntBASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AC025279.2-201ENST00000569730 653 ntBASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.3■□□□□ 0.68
SMC4Q9NTJ3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms