Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SEMA4BQ9NPR2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 AL512638.1-201ENST00000457493 794 ntBASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 RARRES2P5-201ENST00000564013 466 ntBASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 AL049840.4-201ENST00000602422 811 ntBASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 AC093525.8-201ENST00000624099 1342 ntBASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.8□□□□□ -0.04
SEMA4BQ9NPR2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 HLA-K-203ENST00000430151 1046 ntBASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 AL138799.1-201ENST00000448213 1675 ntBASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA4BQ9NPR2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA4BQ9NPR2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms