Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PPT1-213ENST00000641319 2388 ntBASIC17.32■□□□□ 0.36
ARID3AQ99856 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC17.32■□□□□ 0.36
ARID3AQ99856 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.32■□□□□ 0.36
ARID3AQ99856 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.32■□□□□ 0.36
ARID3AQ99856 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ARID3AQ99856 AL023775.1-201ENST00000454907 1746 ntBASIC17.32■□□□□ 0.36
ARID3AQ99856 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ARID3AQ99856 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ARID3AQ99856 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.32■□□□□ 0.36
ARID3AQ99856 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ARID3AQ99856 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ARID3AQ99856 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ARID3AQ99856 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.31■□□□□ 0.36
ARID3AQ99856 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.31■□□□□ 0.36
ARID3AQ99856 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.31■□□□□ 0.36
ARID3AQ99856 TSEN15P1-201ENST00000423257 515 ntBASIC17.31■□□□□ 0.36
ARID3AQ99856 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.31■□□□□ 0.36
ARID3AQ99856 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.31■□□□□ 0.36
ARID3AQ99856 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ARID3AQ99856 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ARID3AQ99856 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC17.31■□□□□ 0.36
ARID3AQ99856 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ARID3AQ99856 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC17.3■□□□□ 0.36
ARID3AQ99856 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.3■□□□□ 0.36
ARID3AQ99856 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.3■□□□□ 0.36
ARID3AQ99856 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.3■□□□□ 0.36
ARID3AQ99856 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.3■□□□□ 0.36
ARID3AQ99856 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.3■□□□□ 0.36
ARID3AQ99856 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.3■□□□□ 0.36
ARID3AQ99856 AC018529.1-201ENST00000613063 361 ntBASIC17.3■□□□□ 0.36
ARID3AQ99856 LINC00628-201ENST00000628516 1289 ntBASIC17.3■□□□□ 0.36
ARID3AQ99856 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 CICP11-201ENST00000434745 2827 ntBASIC17.3■□□□□ 0.36
ARID3AQ99856 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ARID3AQ99856 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.3■□□□□ 0.36
ARID3AQ99856 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms