Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.83□□□□□ -0.04
NPAS2Q99743 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
NPAS2Q99743 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS2Q99743 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS2Q99743 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS2Q99743 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS2Q99743 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 API5-211ENST00000534695 560 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS2Q99743 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS2Q99743 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.82□□□□□ -0.04
NPAS2Q99743 AL132655.2-201ENST00000596276 594 ntBASIC14.82□□□□□ -0.04
NPAS2Q99743 AC004461.2-201ENST00000629517 803 ntBASIC14.82□□□□□ -0.04
NPAS2Q99743 AC025048.6-201ENST00000634326 1161 ntBASIC14.82□□□□□ -0.04
NPAS2Q99743 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPAS2Q99743 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 BEND3P1-201ENST00000421591 1944 ntBASIC14.82□□□□□ -0.04
NPAS2Q99743 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS2Q99743 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS2Q99743 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS2Q99743 AL589987.1-201ENST00000453380 819 ntBASIC14.81□□□□□ -0.04
NPAS2Q99743 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS2Q99743 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS2Q99743 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS2Q99743 AC005225.4-201ENST00000557330 545 ntBASIC14.81□□□□□ -0.04
NPAS2Q99743 AC012645.4-201ENST00000610691 1061 ntBASIC14.81□□□□□ -0.04
NPAS2Q99743 MIR6069-201ENST00000620069 79 ntBASIC14.81□□□□□ -0.04
NPAS2Q99743 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.81□□□□□ -0.04
NPAS2Q99743 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.81□□□□□ -0.04
NPAS2Q99743 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 AC007326.2-201ENST00000624224 7579 ntBASIC14.81□□□□□ -0.04
NPAS2Q99743 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms