Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC004967.1-201ENST00000453589 447 ntBASIC11.78□□□□□ -0.52
TRGV9Q99603 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV9Q99603 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRGV9Q99603 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.78□□□□□ -0.52
TRGV9Q99603 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.78□□□□□ -0.52
TRGV9Q99603 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV9Q99603 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV9Q99603 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV9Q99603 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 AL391069.4-201ENST00000609583 481 ntBASIC11.78□□□□□ -0.52
TRGV9Q99603 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
TRGV9Q99603 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC134684.3-201ENST00000641758 218 ntBASIC11.78□□□□□ -0.52
TRGV9Q99603 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV9Q99603 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV9Q99603 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV9Q99603 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRGV9Q99603 AL138799.1-201ENST00000448213 1675 ntBASIC11.78□□□□□ -0.52
TRGV9Q99603 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV9Q99603 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV9Q99603 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.77□□□□□ -0.52
TRGV9Q99603 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.77□□□□□ -0.52
TRGV9Q99603 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.77□□□□□ -0.52
TRGV9Q99603 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
TRGV9Q99603 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.77□□□□□ -0.52
TRGV9Q99603 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
TRGV9Q99603 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV9Q99603 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
TRGV9Q99603 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TRGV9Q99603 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AC092580.3-201ENST00000430932 139 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.77□□□□□ -0.53
TRGV9Q99603 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.77□□□□□ -0.53
TRGV9Q99603 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AC026410.3-201ENST00000514280 936 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AC092865.5-201ENST00000545435 363 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AC004449.1-201ENST00000564240 433 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AC036164.1-201ENST00000570544 333 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TRGV9Q99603 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV9Q99603 AL590560.3-201ENST00000623350 461 ntBASIC11.77□□□□□ -0.53
TRGV9Q99603 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
TRGV9Q99603 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV9Q99603 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms