Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.12■□□□□ 0.49
EYA3Q99504 AC103810.10-201ENST00000606504 343 ntBASIC18.12■□□□□ 0.49
EYA3Q99504 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.12■□□□□ 0.49
EYA3Q99504 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.12■□□□□ 0.49
EYA3Q99504 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
EYA3Q99504 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.12■□□□□ 0.49
EYA3Q99504 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.12■□□□□ 0.49
EYA3Q99504 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.12■□□□□ 0.49
EYA3Q99504 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EYA3Q99504 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EYA3Q99504 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.12■□□□□ 0.49
EYA3Q99504 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EYA3Q99504 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.12■□□□□ 0.49
EYA3Q99504 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.11■□□□□ 0.49
EYA3Q99504 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 AC008723.1-201ENST00000506922 207 ntBASIC18.11■□□□□ 0.49
EYA3Q99504 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.11■□□□□ 0.49
EYA3Q99504 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
EYA3Q99504 AL157813.1-201ENST00000612996 587 ntBASIC18.11■□□□□ 0.49
EYA3Q99504 AL805961.1-201ENST00000642026 753 ntBASIC18.11■□□□□ 0.49
EYA3Q99504 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
EYA3Q99504 FAM90A2P-201ENST00000511144 1395 ntBASIC18.11■□□□□ 0.49
EYA3Q99504 FAM90A25P-201ENST00000528404 1395 ntBASIC18.11■□□□□ 0.49
EYA3Q99504 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
EYA3Q99504 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
EYA3Q99504 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.11■□□□□ 0.49
EYA3Q99504 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
EYA3Q99504 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
EYA3Q99504 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EYA3Q99504 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
EYA3Q99504 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.1■□□□□ 0.49
EYA3Q99504 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
EYA3Q99504 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.1■□□□□ 0.49
EYA3Q99504 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 AC006122.1-201ENST00000493323 440 ntBASIC18.1■□□□□ 0.49
EYA3Q99504 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.1■□□□□ 0.49
EYA3Q99504 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.1■□□□□ 0.49
EYA3Q99504 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.1■□□□□ 0.49
EYA3Q99504 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.1■□□□□ 0.49
EYA3Q99504 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.1■□□□□ 0.49
EYA3Q99504 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.1■□□□□ 0.49
EYA3Q99504 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.1■□□□□ 0.49
EYA3Q99504 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 AC008741.2-201ENST00000612792 3115 ntBASIC18.1■□□□□ 0.49
EYA3Q99504 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
EYA3Q99504 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
EYA3Q99504 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.1■□□□□ 0.49
EYA3Q99504 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.1■□□□□ 0.49
EYA3Q99504 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EYA3Q99504 ZBED1P1-201ENST00000502364 1930 ntBASIC18.1■□□□□ 0.49
EYA3Q99504 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms