Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 SPCS2P1-201ENST00000561636 679 ntBASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC133539.2-201ENST00000604757 467 ntBASIC14.35□□□□□ -0.11
BBS4Q96RK4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC008761.3-201ENST00000624803 892 ntBASIC14.35□□□□□ -0.11
BBS4Q96RK4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 AC015656.1-201ENST00000624209 3578 ntBASIC14.35□□□□□ -0.11
BBS4Q96RK4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
BBS4Q96RK4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.35□□□□□ -0.11
BBS4Q96RK4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AC007292.2-201ENST00000593524 1812 ntBASIC14.34□□□□□ -0.11
BBS4Q96RK4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AL359711.2-201ENST00000563105 872 ntBASIC14.34□□□□□ -0.11
BBS4Q96RK4 RN7SL204P-201ENST00000582831 262 ntBASIC14.34□□□□□ -0.11
BBS4Q96RK4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 CHCHD2P3-201ENST00000603038 451 ntBASIC14.34□□□□□ -0.11
BBS4Q96RK4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AL390755.1-201ENST00000623716 2027 ntBASIC14.34□□□□□ -0.11
BBS4Q96RK4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
BBS4Q96RK4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
BBS4Q96RK4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BBS4Q96RK4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
BBS4Q96RK4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
BBS4Q96RK4 KRT8P22-201ENST00000562317 1415 ntBASIC14.33□□□□□ -0.11
BBS4Q96RK4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
BBS4Q96RK4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
BBS4Q96RK4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
BBS4Q96RK4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.33□□□□□ -0.12
BBS4Q96RK4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS4Q96RK4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS4Q96RK4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.33□□□□□ -0.12
BBS4Q96RK4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
BBS4Q96RK4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms