Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
C9orf85Q96MD7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 MIR943-201ENST00000401286 94 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 RPL13AP25-201ENST00000484130 612 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 IGHV3-42-201ENST00000520410 361 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 AC135586.1-201ENST00000539323 574 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 AC093813.1-201ENST00000605066 256 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 AL662799.1-202ENST00000614205 422 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PRSS30P-206ENST00000641773 873 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.94□□□□□ -0.66
C9orf85Q96MD7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
C9orf85Q96MD7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 SBF1P1-201ENST00000444527 5631 ntBASIC10.93□□□□□ -0.66
C9orf85Q96MD7 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
C9orf85Q96MD7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms