Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 AL158070.2-201ENST00000623713 1621 ntBASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 DGCR9-201ENST00000609630 2415 ntBASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHAMP1Q96JM3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 AC063926.3-201ENST00000624734 5658 ntBASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 AC019294.4-201ENST00000561777 2905 ntBASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHAMP1Q96JM3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 TPT1P11-201ENST00000458482 498 ntBASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 AC073592.8-201ENST00000624126 511 ntBASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms