Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.19□□□□□ -0.3
FOXRED1Q96CU9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 TUBB3P1-201ENST00000405796 1332 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AC107890.1-201ENST00000422478 521 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 RFPL4AP1-201ENST00000530883 850 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AC025048.3-201ENST00000590609 569 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AC005702.4-201ENST00000618393 416 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AL033527.5-202ENST00000641632 1098 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CETN4P-206ENST00000642099 2168 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 AL121723.1-201ENST00000445194 1519 ntBASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.18□□□□□ -0.3
FOXRED1Q96CU9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 AC097359.2-201ENST00000604992 2389 ntBASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FOXRED1Q96CU9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms