Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AL603832.2-201ENST00000566195 2125 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 IFNWP2-201ENST00000431203 580 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC010900.1-201ENST00000449849 1296 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 SIGLEC22P-201ENST00000599104 714 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 RN7SL582P-201ENST00000491078 279 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 MIR6125-201ENST00000618986 96 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AL136172.1-201ENST00000598590 1394 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC095040.1-201ENST00000513286 675 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 RN7SKP155-201ENST00000516031 288 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 FBXO36P1-201ENST00000579006 471 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC006986.1-201ENST00000612764 241 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 LINC00265-2P-201ENST00000413372 782 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PGAM1P11-201ENST00000416729 680 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 MSANTD2P1-201ENST00000445341 1368 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 LAP3P2-201ENST00000454686 1454 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 AC103702.1-201ENST00000548801 2630 ntBASIC9.78□□□□□ -0.84
ALMS1Q8TCU4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC9.77□□□□□ -0.84
ALMS1Q8TCU4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC9.77□□□□□ -0.84
ALMS1Q8TCU4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
ALMS1Q8TCU4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.84
ALMS1Q8TCU4 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC9.77□□□□□ -0.84
ALMS1Q8TCU4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.77□□□□□ -0.84
ALMS1Q8TCU4 AC136604.1-202ENST00000425471 771 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CDCA4P4-201ENST00000435216 680 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AC245369.7-201ENST00000631386 350 ntBASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
ALMS1Q8TCU4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms