Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 RPL5P21-201ENST00000404620 815 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 FDX1P1-201ENST00000449115 551 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 KRT8P48-201ENST00000515599 1220 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 AC097359.3-201ENST00000603982 1210 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 MEX3B-202ENST00000558133 4333 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 AC105206.1-202ENST00000314927 2368 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 AC027612.1-201ENST00000445234 2395 ntBASIC14.74□□□□□ -0.05
HIPK4Q8NE63 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIPK4Q8NE63 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 PPT1-213ENST00000641319 2388 ntBASIC14.73□□□□□ -0.05
HIPK4Q8NE63 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AC023274.1-201ENST00000418278 595 ntBASIC14.73□□□□□ -0.05
HIPK4Q8NE63 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AP3S2-216ENST00000617003 1561 ntBASIC14.73□□□□□ -0.05
HIPK4Q8NE63 AL607033.1-201ENST00000623900 1599 ntBASIC14.73□□□□□ -0.05
HIPK4Q8NE63 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIPK4Q8NE63 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIPK4Q8NE63 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms