Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SIMC1Q8NDZ2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 RPL13AP25-201ENST00000484130 612 ntBASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 AC133539.2-201ENST00000604757 467 ntBASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 AC025048.6-201ENST00000634326 1161 ntBASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.26□□□□□ -0.13
SIMC1Q8NDZ2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 RNU1-114P-201ENST00000365297 166 ntBASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 SOCS2P1-201ENST00000417727 557 ntBASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.25□□□□□ -0.13
SIMC1Q8NDZ2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms