Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 MIR3188-201ENST00000583494 85 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC138696.2-201ENST00000607376 223 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC026434.2-201ENST00000506094 1078 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC093826.1-201ENST00000508655 993 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 FAM86B3P-203ENST00000523992 854 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 MIR2392-201ENST00000584881 84 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 MIR6746-201ENST00000620971 63 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 AL137783.1-201ENST00000623494 1896 ntBASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC168Q8NDH2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AL512306.1-201ENST00000432698 848 ntBASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 NHP2P1-201ENST00000335274 462 ntBASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.43□□□□□ -0.42
CCDC168Q8NDH2 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms