Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEFF1Q8IYR6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 AC006453.1-201ENST00000636037 1257 ntBASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEFF1Q8IYR6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 NFIC-211ENST00000641145 8399 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC073150.1-201ENST00000450406 1084 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC104784.1-201ENST00000473096 294 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC019193.1-201ENST00000506678 823 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AL132994.2-201ENST00000603120 687 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC138696.2-201ENST00000607376 223 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC073352.2-201ENST00000609385 439 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 AC068587.6-202ENST00000641839 5619 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEFF1Q8IYR6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms