Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 AC023968.2-201ENST00000560593 1049 ntBASIC20.64■□□□□ 0.89
UBR1Q8IWV7 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 AL512599.1-201ENST00000430724 685 ntBASIC20.63■□□□□ 0.89
UBR1Q8IWV7 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 AC025186.1-201ENST00000478174 870 ntBASIC20.63■□□□□ 0.89
UBR1Q8IWV7 ALG1L7P-201ENST00000502317 768 ntBASIC20.63■□□□□ 0.89
UBR1Q8IWV7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 VENTXP3-201ENST00000546480 773 ntBASIC20.63■□□□□ 0.89
UBR1Q8IWV7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBR1Q8IWV7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 BRI3P1-201ENST00000440440 378 ntBASIC20.62■□□□□ 0.89
UBR1Q8IWV7 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 RN7SL767P-201ENST00000493013 295 ntBASIC20.62■□□□□ 0.89
UBR1Q8IWV7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 LAP3P2-201ENST00000454686 1454 ntBASIC20.62■□□□□ 0.89
UBR1Q8IWV7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBR1Q8IWV7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 RN7SL788P-201ENST00000460504 316 ntBASIC20.61■□□□□ 0.89
UBR1Q8IWV7 GOLGA2P7-209ENST00000560408 745 ntBASIC20.61■□□□□ 0.89
UBR1Q8IWV7 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 MIR6816-201ENST00000620368 66 ntBASIC20.61■□□□□ 0.89
UBR1Q8IWV7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBR1Q8IWV7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms