Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 AC023090.2-201ENST00000625182 2110 ntBASIC15.04■□□□□ -0
NUDCD3Q8IVD9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.04■□□□□ -0
NUDCD3Q8IVD9 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 MIR940-201ENST00000401276 94 ntBASIC15.03■□□□□ -0
NUDCD3Q8IVD9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 CEND1P1-201ENST00000451006 455 ntBASIC15.03■□□□□ -0
NUDCD3Q8IVD9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NUDCD3Q8IVD9 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 ELL2P1-201ENST00000413990 1906 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AL627223.1-201ENST00000416693 442 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AC004832.2-201ENST00000426397 482 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 SPDYE14P-201ENST00000442619 822 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AC026150.2-201ENST00000564693 1156 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 MIR4453-201ENST00000584019 89 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 MTDHP5-201ENST00000598980 586 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 LINC01115-203ENST00000606068 577 ntBASIC15.02■□□□□ -0
NUDCD3Q8IVD9 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.02■□□□□ -0
NUDCD3Q8IVD9 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 AC089987.1-201ENST00000551654 2209 ntBASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUDCD3Q8IVD9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms