Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AC092506.1-202ENST00000401022 528 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 VDAC1P1-201ENST00000439229 848 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 RN7SL769P-201ENST00000469386 295 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AF254983.2-201ENST00000612331 135 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AC015967.2-201ENST00000624092 234 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AC006435.4-201ENST00000625037 234 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 AL356737.1-201ENST00000634391 234 ntBASIC15.22■□□□□ 0.03
C12orf40Q86WS4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
C12orf40Q86WS4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 MBLAC2-202ENST00000514906 1936 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SALL4P5-201ENST00000419001 1760 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AC013726.1-201ENST00000563747 2285 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 Z97180.1-201ENST00000445173 988 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 RN7SL720P-201ENST00000488178 304 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 NUP210P1-202ENST00000504322 710 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SNORD3B-2-202ENST00000571722 791 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 AL805961.1-203ENST00000641078 1258 ntBASIC15.21■□□□□ 0.03
C12orf40Q86WS4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
C12orf40Q86WS4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
C12orf40Q86WS4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
C12orf40Q86WS4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
C12orf40Q86WS4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.21■□□□□ 0.02
C12orf40Q86WS4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.21■□□□□ 0.02
C12orf40Q86WS4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C12orf40Q86WS4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms