Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 HLA-V-204ENST00000476601 1289 ntBASIC14.02□□□□□ -0.17
TUBA1AQ71U36 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 MIR4313-201ENST00000580760 101 ntBASIC14.02□□□□□ -0.17
TUBA1AQ71U36 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 AC018892.3-201ENST00000623986 2499 ntBASIC14.02□□□□□ -0.17
TUBA1AQ71U36 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.02□□□□□ -0.17
TUBA1AQ71U36 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.02□□□□□ -0.17
TUBA1AQ71U36 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MST1P2-201ENST00000457982 2291 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 BASP1P1-201ENST00000430708 665 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AC241585.1-201ENST00000433527 519 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AL512638.1-201ENST00000457493 794 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AL590560.3-201ENST00000623350 461 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 AC027612.1-201ENST00000445234 2395 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MTHFR-210ENST00000641407 2387 ntBASIC14.01□□□□□ -0.17
TUBA1AQ71U36 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TUBA1AQ71U36 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TUBA1AQ71U36 ZBTB45P2-201ENST00000452245 1531 ntBASIC14□□□□□ -0.17
TUBA1AQ71U36 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14□□□□□ -0.17
TUBA1AQ71U36 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14□□□□□ -0.17
TUBA1AQ71U36 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14□□□□□ -0.17
TUBA1AQ71U36 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TUBA1AQ71U36 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms