Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC130686.1-201ENST00000622936 2466 ntBASIC14.07□□□□□ -0.16
CD47Q08722 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD47Q08722 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD47Q08722 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD47Q08722 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.07□□□□□ -0.16
CD47Q08722 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CD47Q08722 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.07□□□□□ -0.16
CD47Q08722 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.07□□□□□ -0.16
CD47Q08722 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD47Q08722 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CD47Q08722 AC012508.2-201ENST00000567613 1472 ntBASIC14.06□□□□□ -0.16
CD47Q08722 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 CETN4P-206ENST00000642099 2168 ntBASIC14.06□□□□□ -0.16
CD47Q08722 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
CD47Q08722 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CD47Q08722 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 AC126335.2-201ENST00000623362 4637 ntBASIC14.06□□□□□ -0.16
CD47Q08722 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD47Q08722 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD47Q08722 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 FO393414.2-201ENST00000405153 598 ntBASIC14.06□□□□□ -0.16
CD47Q08722 TSEN15P1-201ENST00000423257 515 ntBASIC14.06□□□□□ -0.16
CD47Q08722 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.06□□□□□ -0.16
CD47Q08722 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.06□□□□□ -0.16
CD47Q08722 AL133215.2-201ENST00000609242 977 ntBASIC14.06□□□□□ -0.16
CD47Q08722 AL691403.2-201ENST00000618460 490 ntBASIC14.06□□□□□ -0.16
CD47Q08722 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD47Q08722 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.06□□□□□ -0.16
CD47Q08722 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD47Q08722 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CD47Q08722 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CD47Q08722 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.05□□□□□ -0.16
CD47Q08722 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 SPDYE17-201ENST00000412399 783 ntBASIC14.05□□□□□ -0.16
CD47Q08722 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.05□□□□□ -0.16
CD47Q08722 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.05□□□□□ -0.16
CD47Q08722 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD47Q08722 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD47Q08722 AL079307.3-201ENST00000556114 283 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms