Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH13P55290 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDH13P55290 AL353779.1-201ENST00000434793 351 ntBASIC14.79□□□□□ -0.04
CDH13P55290 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH13P55290 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH13P55290 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.79□□□□□ -0.04
CDH13P55290 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH13P55290 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH13P55290 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH13P55290 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CDH13P55290 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDH13P55290 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH13P55290 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH13P55290 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDH13P55290 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH13P55290 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.78□□□□□ -0.04
CDH13P55290 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 RARRES2P5-201ENST00000564013 466 ntBASIC14.78□□□□□ -0.04
CDH13P55290 AC036164.1-201ENST00000570544 333 ntBASIC14.78□□□□□ -0.04
CDH13P55290 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.78□□□□□ -0.04
CDH13P55290 AC093512.1-201ENST00000617969 520 ntBASIC14.78□□□□□ -0.04
CDH13P55290 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 HSPA7-201ENST00000445535 1927 ntBASIC14.78□□□□□ -0.04
CDH13P55290 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDH13P55290 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH13P55290 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH13P55290 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CDH13P55290 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH13P55290 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH13P55290 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDH13P55290 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH13P55290 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH13P55290 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH13P55290 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH13P55290 AC018665.1-201ENST00000622927 1362 ntBASIC14.77□□□□□ -0.04
CDH13P55290 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.77□□□□□ -0.04
CDH13P55290 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms