Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AC012508.2-201ENST00000567613 1472 ntBASIC13.89□□□□□ -0.19
CDH11P55287 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CDH11P55287 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AP005018.1-201ENST00000525475 301 ntBASIC13.89□□□□□ -0.19
CDH11P55287 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.89□□□□□ -0.19
CDH11P55287 AC044860.1-202ENST00000559481 777 ntBASIC13.89□□□□□ -0.19
CDH11P55287 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH11P55287 SPDYE22P-201ENST00000582158 798 ntBASIC13.89□□□□□ -0.19
CDH11P55287 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CDH11P55287 MIR6069-201ENST00000620069 79 ntBASIC13.89□□□□□ -0.19
CDH11P55287 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AL033527.5-202ENST00000641632 1098 ntBASIC13.89□□□□□ -0.19
CDH11P55287 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CDH11P55287 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH11P55287 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH11P55287 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH11P55287 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 HSPA7-201ENST00000445535 1927 ntBASIC13.88□□□□□ -0.19
CDH11P55287 AC007541.1-201ENST00000570282 1469 ntBASIC13.88□□□□□ -0.19
CDH11P55287 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDH11P55287 SPDYE17-201ENST00000412399 783 ntBASIC13.88□□□□□ -0.19
CDH11P55287 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
CDH11P55287 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH11P55287 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.88□□□□□ -0.19
CDH11P55287 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 AC025048.6-201ENST00000634326 1161 ntBASIC13.88□□□□□ -0.19
CDH11P55287 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 REXO1L4P-201ENST00000605109 1937 ntBASIC13.88□□□□□ -0.19
CDH11P55287 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 AC063926.2-201ENST00000623766 1308 ntBASIC13.88□□□□□ -0.19
CDH11P55287 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH11P55287 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH11P55287 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDH11P55287 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH11P55287 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CDH11P55287 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms