Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 CLUHP6-201ENST00000580789 941 ntBASIC15.51■□□□□ 0.07
ATXN3P54252 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.51■□□□□ 0.07
ATXN3P54252 AC244669.2-201ENST00000612320 853 ntBASIC15.51■□□□□ 0.07
ATXN3P54252 AC008687.7-202ENST00000637404 953 ntBASIC15.51■□□□□ 0.07
ATXN3P54252 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.51■□□□□ 0.07
ATXN3P54252 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ATXN3P54252 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.51■□□□□ 0.07
ATXN3P54252 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATXN3P54252 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ATXN3P54252 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
ATXN3P54252 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 AC104581.4-201ENST00000623126 3052 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
ATXN3P54252 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.5■□□□□ 0.07
ATXN3P54252 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 PTENP1-202ENST00000532280 3996 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 AL592424.1-201ENST00000563624 1536 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ATXN3P54252 ELK2AP-201ENST00000392510 1007 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 AC245100.5-201ENST00000452108 331 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 AC093433.1-201ENST00000458048 571 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 AC106760.1-201ENST00000508690 800 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 SLED1-202ENST00000512051 380 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.5■□□□□ 0.07
ATXN3P54252 KRT90P-201ENST00000549264 1064 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.5■□□□□ 0.07
ATXN3P54252 DUX4L45-201ENST00000566406 1057 ntBASIC15.5■□□□□ 0.07
ATXN3P54252 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.5■□□□□ 0.07
ATXN3P54252 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ATXN3P54252 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.5■□□□□ 0.07
ATXN3P54252 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.5■□□□□ 0.07
ATXN3P54252 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATXN3P54252 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 AC092127.1-201ENST00000567093 3455 ntBASIC15.49■□□□□ 0.07
ATXN3P54252 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.49■□□□□ 0.07
ATXN3P54252 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.49■□□□□ 0.07
ATXN3P54252 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATXN3P54252 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms