Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRCA2P51587 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.35■□□□□ 0.21
BRCA2P51587 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.35■□□□□ 0.21
BRCA2P51587 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
BRCA2P51587 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BRCA2P51587 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRCA2P51587 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRCA2P51587 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.35■□□□□ 0.21
BRCA2P51587 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC16.35■□□□□ 0.21
BRCA2P51587 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.35■□□□□ 0.21
BRCA2P51587 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.35■□□□□ 0.21
BRCA2P51587 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.35■□□□□ 0.21
BRCA2P51587 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.35■□□□□ 0.21
BRCA2P51587 CYP4F36P-201ENST00000589193 186 ntBASIC16.35■□□□□ 0.21
BRCA2P51587 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.35■□□□□ 0.21
BRCA2P51587 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.34■□□□□ 0.21
BRCA2P51587 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
BRCA2P51587 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.34■□□□□ 0.21
BRCA2P51587 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.34■□□□□ 0.21
BRCA2P51587 BPIFB5P-201ENST00000457066 1099 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.34■□□□□ 0.21
BRCA2P51587 HERC2P11-201ENST00000562845 725 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 AC100756.2-201ENST00000569537 736 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 AL353622.2-201ENST00000605846 425 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 AC004466.2-201ENST00000614749 516 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 MIR6746-201ENST00000620971 63 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 AC110057.1-201ENST00000636031 898 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BRCA2P51587 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
BRCA2P51587 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.34■□□□□ 0.21
BRCA2P51587 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.34■□□□□ 0.21
BRCA2P51587 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 AC092896.1-201ENST00000465850 380 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 RPS18P9-201ENST00000482817 460 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 AC092612.1-201ENST00000514501 998 ntBASIC16.34■□□□□ 0.21
BRCA2P51587 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.34■□□□□ 0.21
BRCA2P51587 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCA2P51587 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BRCA2P51587 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.33■□□□□ 0.21
BRCA2P51587 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.33■□□□□ 0.21
BRCA2P51587 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.33■□□□□ 0.21
BRCA2P51587 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
BRCA2P51587 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BRCA2P51587 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BRCA2P51587 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.33■□□□□ 0.21
BRCA2P51587 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BRCA2P51587 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCA2P51587 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.33■□□□□ 0.2
BRCA2P51587 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.33■□□□□ 0.2
BRCA2P51587 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BRCA2P51587 MIR648-201ENST00000385046 94 ntBASIC16.33■□□□□ 0.2
BRCA2P51587 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BRCA2P51587 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCA2P51587 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BRCA2P51587 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
BRCA2P51587 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCA2P51587 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCA2P51587 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCA2P51587 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BRCA2P51587 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 RN7SL846P-201ENST00000467429 292 ntBASIC16.32■□□□□ 0.2
BRCA2P51587 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.32■□□□□ 0.2
BRCA2P51587 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.32■□□□□ 0.2
BRCA2P51587 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 PSME2-217ENST00000615264 874 ntTSL 5 BASIC16.32■□□□□ 0.2
BRCA2P51587 PSME2-218ENST00000630027 185 ntTSL 3 BASIC16.32■□□□□ 0.2
BRCA2P51587 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.32■□□□□ 0.2
BRCA2P51587 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCA2P51587 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCA2P51587 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.32■□□□□ 0.2
BRCA2P51587 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms