Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.98□□□□□ -0.49
CDC34P49427 AC098831.1-202ENST00000438821 336 ntBASIC11.98□□□□□ -0.49
CDC34P49427 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.98□□□□□ -0.49
CDC34P49427 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.98□□□□□ -0.49
CDC34P49427 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.98□□□□□ -0.49
CDC34P49427 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 AC004877.2-201ENST00000623941 599 ntBASIC11.98□□□□□ -0.49
CDC34P49427 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC34P49427 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 AC130686.1-201ENST00000622936 2466 ntBASIC11.97□□□□□ -0.49
CDC34P49427 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 DGCR9-201ENST00000609630 2415 ntBASIC11.97□□□□□ -0.49
CDC34P49427 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CDC34P49427 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.97□□□□□ -0.49
CDC34P49427 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.97□□□□□ -0.49
CDC34P49427 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 AC112191.1-201ENST00000523689 701 ntBASIC11.97□□□□□ -0.49
CDC34P49427 KRT19P2-202ENST00000557173 1012 ntBASIC11.97□□□□□ -0.49
CDC34P49427 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 AL645728.2-202ENST00000641679 227 ntBASIC11.97□□□□□ -0.49
CDC34P49427 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC34P49427 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC34P49427 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC34P49427 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms