Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC9A3P48764 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC9A3P48764 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC9A3P48764 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC9A3P48764 DNAJB3-202ENST00000449667 1266 ntBASIC13.92□□□□□ -0.18
SLC9A3P48764 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC9A3P48764 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.92□□□□□ -0.18
SLC9A3P48764 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.92□□□□□ -0.18
SLC9A3P48764 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
SLC9A3P48764 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.92□□□□□ -0.18
SLC9A3P48764 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.92□□□□□ -0.18
SLC9A3P48764 AC004461.2-201ENST00000629517 803 ntBASIC13.92□□□□□ -0.18
SLC9A3P48764 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 CICP8-201ENST00000455800 2813 ntBASIC13.92□□□□□ -0.18
SLC9A3P48764 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 AL928921.2-201ENST00000641325 2442 ntBASIC13.92□□□□□ -0.18
SLC9A3P48764 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SLC9A3P48764 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.92□□□□□ -0.18
SLC9A3P48764 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLC9A3P48764 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SLC9A3P48764 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SLC9A3P48764 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.91□□□□□ -0.18
SLC9A3P48764 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 AC107890.1-201ENST00000422478 521 ntBASIC13.91□□□□□ -0.18
SLC9A3P48764 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC9A3P48764 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 AC027369.6-201ENST00000525520 931 ntBASIC13.91□□□□□ -0.18
SLC9A3P48764 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 TIMM17BP1-201ENST00000545713 516 ntBASIC13.91□□□□□ -0.18
SLC9A3P48764 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC9A3P48764 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.91□□□□□ -0.18
SLC9A3P48764 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.91□□□□□ -0.18
SLC9A3P48764 AL158211.3-201ENST00000607385 239 ntBASIC13.91□□□□□ -0.18
SLC9A3P48764 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.91□□□□□ -0.18
SLC9A3P48764 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SLC9A3P48764 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 AC007787.1-201ENST00000588095 1583 ntBASIC13.91□□□□□ -0.18
SLC9A3P48764 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.91□□□□□ -0.18
SLC9A3P48764 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLC9A3P48764 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLC9A3P48764 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
SLC9A3P48764 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC9A3P48764 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC9A3P48764 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SLC9A3P48764 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.9□□□□□ -0.18
SLC9A3P48764 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLC9A3P48764 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms