Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX5P48382 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX5P48382 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFX5P48382 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX5P48382 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFX5P48382 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX5P48382 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RFX5P48382 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.26■□□□□ 0.51
RFX5P48382 FNTAP2-201ENST00000430308 634 ntBASIC18.26■□□□□ 0.51
RFX5P48382 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.26■□□□□ 0.51
RFX5P48382 SNORD3B-2-202ENST00000571722 791 ntBASIC18.26■□□□□ 0.51
RFX5P48382 AP000346.4-201ENST00000614827 381 ntBASIC18.26■□□□□ 0.51
RFX5P48382 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
RFX5P48382 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX5P48382 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFX5P48382 CYP4F23P-201ENST00000593402 1579 ntBASIC18.25■□□□□ 0.51
RFX5P48382 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 PKD1P1-201ENST00000458669 6805 ntBASIC18.25■□□□□ 0.51
RFX5P48382 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFX5P48382 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX5P48382 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RFX5P48382 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 FAM58BP-201ENST00000439056 645 ntBASIC18.25■□□□□ 0.51
RFX5P48382 AC012441.2-201ENST00000444843 739 ntBASIC18.25■□□□□ 0.51
RFX5P48382 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX5P48382 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX5P48382 SCARNA21-201ENST00000517026 139 ntBASIC18.25■□□□□ 0.51
RFX5P48382 AC022217.1-201ENST00000521069 738 ntBASIC18.25■□□□□ 0.51
RFX5P48382 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX5P48382 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX5P48382 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX5P48382 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX5P48382 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX5P48382 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX5P48382 AC136759.1-202ENST00000530858 2194 ntBASIC18.25■□□□□ 0.51
RFX5P48382 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.25■□□□□ 0.51
RFX5P48382 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX5P48382 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFX5P48382 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RFX5P48382 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX5P48382 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX5P48382 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX5P48382 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX5P48382 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
RFX5P48382 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX5P48382 CALR4P-201ENST00000431943 946 ntBASIC18.24■□□□□ 0.51
RFX5P48382 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.24■□□□□ 0.51
RFX5P48382 AL035414.1-201ENST00000451327 857 ntBASIC18.24■□□□□ 0.51
RFX5P48382 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX5P48382 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX5P48382 SCARNA20.5-201ENST00000516991 142 ntBASIC18.24■□□□□ 0.51
RFX5P48382 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX5P48382 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX5P48382 ACTG1P17-201ENST00000558391 1119 ntBASIC18.24■□□□□ 0.51
RFX5P48382 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms