Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.63□□□□□ -0.23
APOBEC1P41238 C2orf27AP3-201ENST00000434123 579 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 USP32P1-208ENST00000506594 1164 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 BTNL10-201ENST00000595971 695 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 AC008735.3-201ENST00000596646 500 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOBEC1P41238 AL354718.3-201ENST00000616414 581 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 ENPP7P14-201ENST00000621765 1040 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 CR382287.1-201ENST00000623954 586 ntBASIC13.63□□□□□ -0.23
APOBEC1P41238 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOBEC1P41238 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBEC1P41238 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.63□□□□□ -0.23
APOBEC1P41238 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
APOBEC1P41238 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
APOBEC1P41238 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 AC007969.1-201ENST00000433675 447 ntBASIC13.62□□□□□ -0.23
APOBEC1P41238 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.62□□□□□ -0.23
APOBEC1P41238 FO681548.1-201ENST00000455617 1132 ntBASIC13.62□□□□□ -0.23
APOBEC1P41238 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.62□□□□□ -0.23
APOBEC1P41238 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.62□□□□□ -0.23
APOBEC1P41238 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.62□□□□□ -0.23
APOBEC1P41238 IGHV3-72-202ENST00000621503 303 ntBASIC13.62□□□□□ -0.23
APOBEC1P41238 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms