Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL15A1P39059 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.82■□□□□ 0.6
COL15A1P39059 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL15A1P39059 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL15A1P39059 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL15A1P39059 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COL15A1P39059 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 AL627231.1-201ENST00000394467 1125 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.81■□□□□ 0.6
COL15A1P39059 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.81■□□□□ 0.6
COL15A1P39059 AC242376.2-201ENST00000619355 883 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 AC144522.1-201ENST00000625111 1658 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
COL15A1P39059 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 FRMPD2B-201ENST00000431305 1347 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 AC074138.1-201ENST00000611182 1303 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.81■□□□□ 0.6
COL15A1P39059 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.81■□□□□ 0.6
COL15A1P39059 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.81■□□□□ 0.6
COL15A1P39059 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
COL15A1P39059 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL15A1P39059 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.81■□□□□ 0.6
COL15A1P39059 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.81■□□□□ 0.6
COL15A1P39059 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.81■□□□□ 0.6
COL15A1P39059 FAM90A2P-201ENST00000511144 1395 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 FAM90A25P-201ENST00000528404 1395 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL15A1P39059 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 SALL4P5-201ENST00000419001 1760 ntBASIC18.8■□□□□ 0.6
COL15A1P39059 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.8■□□□□ 0.6
COL15A1P39059 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL15A1P39059 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms