Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFC1P35251 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC1P35251 KLF2P2-201ENST00000416807 1039 ntBASIC15.92■□□□□ 0.14
RFC1P35251 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC1P35251 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.92■□□□□ 0.14
RFC1P35251 AC114812.1-204ENST00000449669 728 ntBASIC15.92■□□□□ 0.14
RFC1P35251 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.92■□□□□ 0.14
RFC1P35251 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.92■□□□□ 0.14
RFC1P35251 DUX4L47-201ENST00000566374 394 ntBASIC15.92■□□□□ 0.14
RFC1P35251 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 AC138761.1-201ENST00000584393 385 ntBASIC15.92■□□□□ 0.14
RFC1P35251 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFC1P35251 AL033527.5-201ENST00000641382 801 ntBASIC15.92■□□□□ 0.14
RFC1P35251 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RFC1P35251 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFC1P35251 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFC1P35251 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC1P35251 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.91■□□□□ 0.14
RFC1P35251 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.91■□□□□ 0.14
RFC1P35251 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC1P35251 ACKR1-201ENST00000368121 1240 ntBASIC15.91■□□□□ 0.14
RFC1P35251 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RFC1P35251 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.91■□□□□ 0.14
RFC1P35251 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.91■□□□□ 0.14
RFC1P35251 AP005019.2-201ENST00000615104 511 ntBASIC15.91■□□□□ 0.14
RFC1P35251 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.91■□□□□ 0.14
RFC1P35251 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.91■□□□□ 0.14
RFC1P35251 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RFC1P35251 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC1P35251 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 AC140479.7-201ENST00000636301 2332 ntBASIC15.9■□□□□ 0.14
RFC1P35251 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 AC007292.2-201ENST00000593524 1812 ntBASIC15.9■□□□□ 0.14
RFC1P35251 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC1P35251 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC1P35251 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC1P35251 AL162726.2-201ENST00000438986 1017 ntBASIC15.9■□□□□ 0.14
RFC1P35251 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms