Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC148477.9-201ENST00000623974 539 ntBASIC17.53■□□□□ 0.4
COL4A5P29400 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A5P29400 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A5P29400 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A5P29400 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A5P29400 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.53■□□□□ 0.4
COL4A5P29400 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL4A5P29400 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COL4A5P29400 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.53■□□□□ 0.4
COL4A5P29400 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL4A5P29400 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A5P29400 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
COL4A5P29400 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
COL4A5P29400 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A5P29400 CASP16P-204ENST00000635032 809 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A5P29400 AGGF1P1-201ENST00000509500 2073 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A5P29400 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A5P29400 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A21P-201ENST00000510875 1396 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A15P-201ENST00000514465 1395 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A6P-201ENST00000515148 1394 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A16P-201ENST00000526662 1395 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A9P-201ENST00000527940 1395 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A5P-201ENST00000528738 1395 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A14P-201ENST00000530386 1395 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 FAM90A13P-201ENST00000534703 1395 ntBASIC17.52■□□□□ 0.4
COL4A5P29400 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A5P29400 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A5P29400 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
COL4A5P29400 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 AC067931.2-201ENST00000623655 2003 ntBASIC17.52■□□□□ 0.39
COL4A5P29400 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A5P29400 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A5P29400 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
COL4A5P29400 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.52■□□□□ 0.39
COL4A5P29400 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
COL4A5P29400 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A5P29400 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.52■□□□□ 0.39
COL4A5P29400 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.52■□□□□ 0.39
COL4A5P29400 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.52■□□□□ 0.39
COL4A5P29400 AC226150.1-201ENST00000544259 466 ntBASIC17.52■□□□□ 0.39
COL4A5P29400 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.52■□□□□ 0.39
COL4A5P29400 AC010976.2-201ENST00000609697 852 ntBASIC17.52■□□□□ 0.39
COL4A5P29400 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
COL4A5P29400 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 AC021305.1-201ENST00000520656 1514 ntBASIC17.51■□□□□ 0.39
COL4A5P29400 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COL4A5P29400 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A5P29400 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.51■□□□□ 0.39
COL4A5P29400 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A5P29400 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COL4A5P29400 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A5P29400 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A5P29400 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms