Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.35□□□□□ -0.11
LAMA1P25391 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.35□□□□□ -0.11
LAMA1P25391 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 PSMD4P1-201ENST00000433951 1109 ntBASIC14.35□□□□□ -0.11
LAMA1P25391 FAM86KP-201ENST00000509817 987 ntBASIC14.35□□□□□ -0.11
LAMA1P25391 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.35□□□□□ -0.11
LAMA1P25391 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
LAMA1P25391 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 AC068867.1-201ENST00000559855 150 ntBASIC14.35□□□□□ -0.11
LAMA1P25391 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.35□□□□□ -0.11
LAMA1P25391 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.35□□□□□ -0.11
LAMA1P25391 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.35□□□□□ -0.11
LAMA1P25391 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 AHCYP4-201ENST00000419201 1315 ntBASIC14.35□□□□□ -0.11
LAMA1P25391 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LAMA1P25391 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.35□□□□□ -0.11
LAMA1P25391 TREHP1-201ENST00000531328 465 ntBASIC14.35□□□□□ -0.11
LAMA1P25391 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.35□□□□□ -0.11
LAMA1P25391 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LAMA1P25391 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 AL672207.1-201ENST00000328462 1570 ntBASIC14.34□□□□□ -0.11
LAMA1P25391 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 AC084752.1-201ENST00000509766 622 ntBASIC14.34□□□□□ -0.11
LAMA1P25391 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.34□□□□□ -0.11
LAMA1P25391 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.34□□□□□ -0.11
LAMA1P25391 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
LAMA1P25391 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.34□□□□□ -0.11
LAMA1P25391 AC138701.2-201ENST00000553634 226 ntBASIC14.34□□□□□ -0.11
LAMA1P25391 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
LAMA1P25391 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.34□□□□□ -0.11
LAMA1P25391 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LAMA1P25391 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LAMA1P25391 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LAMA1P25391 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.33□□□□□ -0.11
LAMA1P25391 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
LAMA1P25391 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LAMA1P25391 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.33□□□□□ -0.11
LAMA1P25391 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.33□□□□□ -0.11
LAMA1P25391 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LAMA1P25391 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.33□□□□□ -0.11
LAMA1P25391 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LAMA1P25391 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LAMA1P25391 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LAMA1P25391 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LAMA1P25391 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LAMA1P25391 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.33□□□□□ -0.12
LAMA1P25391 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LAMA1P25391 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LAMA1P25391 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.33□□□□□ -0.12
LAMA1P25391 AL162727.3-201ENST00000635661 2787 ntBASIC14.33□□□□□ -0.12
LAMA1P25391 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.33□□□□□ -0.12
LAMA1P25391 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.33□□□□□ -0.12
LAMA1P25391 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.33□□□□□ -0.12
LAMA1P25391 AC093909.3-201ENST00000504783 336 ntBASIC14.33□□□□□ -0.12
LAMA1P25391 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.33□□□□□ -0.12
LAMA1P25391 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms