Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNA2P20248 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.33□□□□□ -0.12
CCNA2P20248 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNA2P20248 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CCNA2P20248 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.33□□□□□ -0.12
CCNA2P20248 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNA2P20248 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNA2P20248 AL645939.2-201ENST00000427340 991 ntBASIC14.32□□□□□ -0.12
CCNA2P20248 TARDBPP1-201ENST00000442013 1203 ntBASIC14.32□□□□□ -0.12
CCNA2P20248 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNA2P20248 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNA2P20248 HLA-V-204ENST00000476601 1289 ntBASIC14.32□□□□□ -0.12
CCNA2P20248 RN7SL618P-201ENST00000477850 296 ntBASIC14.32□□□□□ -0.12
CCNA2P20248 AC097493.3-201ENST00000509725 367 ntBASIC14.32□□□□□ -0.12
CCNA2P20248 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.32□□□□□ -0.12
CCNA2P20248 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 AL390754.1-201ENST00000619088 582 ntBASIC14.32□□□□□ -0.12
CCNA2P20248 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CCNA2P20248 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCNA2P20248 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.32□□□□□ -0.12
CCNA2P20248 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCNA2P20248 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCNA2P20248 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCNA2P20248 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CCNA2P20248 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 AC011474.4-201ENST00000623523 2076 ntBASIC14.31□□□□□ -0.12
CCNA2P20248 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.31□□□□□ -0.12
CCNA2P20248 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.31□□□□□ -0.12
CCNA2P20248 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCNA2P20248 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.31□□□□□ -0.12
CCNA2P20248 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.31□□□□□ -0.12
CCNA2P20248 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.31□□□□□ -0.12
CCNA2P20248 AL512361.1-201ENST00000554200 418 ntBASIC14.31□□□□□ -0.12
CCNA2P20248 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms