Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.55■□□□□ 0.24
SMPD1P17405 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 AC098935.1-201ENST00000446057 611 ntBASIC16.55■□□□□ 0.24
SMPD1P17405 RN7SL181P-201ENST00000462921 277 ntBASIC16.55■□□□□ 0.24
SMPD1P17405 AC104784.1-201ENST00000473096 294 ntBASIC16.55■□□□□ 0.24
SMPD1P17405 RN7SL67P-201ENST00000492147 296 ntBASIC16.55■□□□□ 0.24
SMPD1P17405 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.55■□□□□ 0.24
SMPD1P17405 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.55■□□□□ 0.24
SMPD1P17405 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 AL805961.1-201ENST00000642026 753 ntBASIC16.55■□□□□ 0.24
SMPD1P17405 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMPD1P17405 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SMPD1P17405 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMPD1P17405 TMBIM7P-202ENST00000641474 1516 ntBASIC16.55■□□□□ 0.24
SMPD1P17405 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 CAP2P1-201ENST00000557743 1390 ntBASIC16.54■□□□□ 0.24
SMPD1P17405 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.54■□□□□ 0.24
SMPD1P17405 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 AC026320.2-201ENST00000434379 478 ntBASIC16.54■□□□□ 0.24
SMPD1P17405 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.54■□□□□ 0.24
SMPD1P17405 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.54■□□□□ 0.24
SMPD1P17405 RBM8B-201ENST00000555532 525 ntBASIC16.54■□□□□ 0.24
SMPD1P17405 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 MIR6769A-201ENST00000617340 73 ntBASIC16.54■□□□□ 0.24
SMPD1P17405 AC051619.9-201ENST00000623237 597 ntBASIC16.54■□□□□ 0.24
SMPD1P17405 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.54■□□□□ 0.24
SMPD1P17405 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.54■□□□□ 0.24
SMPD1P17405 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMPD1P17405 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.53■□□□□ 0.24
SMPD1P17405 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMPD1P17405 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SMPD1P17405 FAM90A2P-201ENST00000511144 1395 ntBASIC16.53■□□□□ 0.24
SMPD1P17405 FAM90A25P-201ENST00000528404 1395 ntBASIC16.53■□□□□ 0.24
SMPD1P17405 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMPD1P17405 LINC01165-201ENST00000445190 1623 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms