Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 AC023141.5-201ENST00000458585 616 ntBASIC12.82□□□□□ -0.36
HIST1H1DP16402 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 AC004461.2-201ENST00000629517 803 ntBASIC12.82□□□□□ -0.36
HIST1H1DP16402 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H1DP16402 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1DP16402 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC016397.2-201ENST00000624848 1985 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AL137783.1-201ENST00000623494 1896 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 PTENP1-202ENST00000532280 3996 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 DNAJB3-201ENST00000446806 729 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 HLA-V-204ENST00000476601 1289 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 SDHAP3-202ENST00000515467 728 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC010336.2-201ENST00000564226 506 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC051619.7-201ENST00000568314 623 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AL109936.8-201ENST00000641772 604 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1DP16402 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H1DP16402 AC138969.2-201ENST00000532739 9932 ntBASIC12.81□□□□□ -0.36
HIST1H1DP16402 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms