Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.66□□□□□ -0.22
CLUP10909 AP006288.1-201ENST00000446065 395 ntBASIC13.66□□□□□ -0.22
CLUP10909 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CLUP10909 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLUP10909 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.66□□□□□ -0.22
CLUP10909 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.66□□□□□ -0.22
CLUP10909 SNHG9-202ENST00000564014 471 ntBASIC13.66□□□□□ -0.22
CLUP10909 SAMD11P1-201ENST00000571429 661 ntBASIC13.66□□□□□ -0.22
CLUP10909 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CLUP10909 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CLUP10909 AC073592.8-201ENST00000624126 511 ntBASIC13.66□□□□□ -0.22
CLUP10909 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.66□□□□□ -0.22
CLUP10909 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.66□□□□□ -0.22
CLUP10909 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.66□□□□□ -0.22
CLUP10909 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.66□□□□□ -0.22
CLUP10909 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CLUP10909 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLUP10909 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CLUP10909 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLUP10909 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.66□□□□□ -0.22
CLUP10909 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 PEG13-201ENST00000631594 5667 ntBASIC13.65□□□□□ -0.22
CLUP10909 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 HSPA7-201ENST00000445535 1927 ntBASIC13.65□□□□□ -0.22
CLUP10909 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CLUP10909 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 AC125807.1-201ENST00000483097 614 ntBASIC13.65□□□□□ -0.22
CLUP10909 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 SDHAP3-202ENST00000515467 728 ntBASIC13.65□□□□□ -0.22
CLUP10909 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.65□□□□□ -0.22
CLUP10909 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.65□□□□□ -0.22
CLUP10909 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.65□□□□□ -0.22
CLUP10909 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLUP10909 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
CLUP10909 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLUP10909 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.65□□□□□ -0.22
CLUP10909 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLUP10909 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.23
CLUP10909 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CLUP10909 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CLUP10909 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
CLUP10909 TUBB3P1-201ENST00000405796 1332 ntBASIC13.64□□□□□ -0.23
CLUP10909 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLUP10909 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.64□□□□□ -0.23
CLUP10909 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.64□□□□□ -0.23
CLUP10909 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLUP10909 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.64□□□□□ -0.23
CLUP10909 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLUP10909 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLUP10909 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLUP10909 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLUP10909 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms