Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 SPDYE19P-201ENST00000338590 713 ntBASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 AL390955.2-201ENST00000603032 514 ntBASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 AC023090.2-201ENST00000625182 2110 ntBASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HNRNPCL4P0DMR1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 TPT1P11-201ENST00000458482 498 ntBASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HNRNPCL4P0DMR1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HNRNPCL4P0DMR1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms