Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 MYO15B-237ENST00000642007 4893 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AC079776.1-201ENST00000401540 1152 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 FO681548.1-201ENST00000455617 1132 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 HILS1-202ENST00000545329 423 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AC025279.2-201ENST00000569730 653 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 ECM1P1-201ENST00000604092 1279 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRBV12-3P01733 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
TRBV12-3P01733 CICP14-201ENST00000629111 2732 ntBASIC11.66□□□□□ -0.54
TRBV12-3P01733 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 PDIA3P1-201ENST00000471856 1510 ntBASIC11.65□□□□□ -0.54
TRBV12-3P01733 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TRBV12-3P01733 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms