Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
PRAMEF11O60813 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.23■□□□□ 0.03
PRAMEF11O60813 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.23■□□□□ 0.03
PRAMEF11O60813 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
PRAMEF11O60813 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRAMEF11O60813 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 AC009093.2-202ENST00000620513 2079 ntBASIC15.22■□□□□ 0.03
PRAMEF11O60813 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 GCOM2-201ENST00000509133 1104 ntBASIC15.22■□□□□ 0.03
PRAMEF11O60813 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 MTHFR-210ENST00000641407 2387 ntBASIC15.22■□□□□ 0.03
PRAMEF11O60813 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.22■□□□□ 0.03
PRAMEF11O60813 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRAMEF11O60813 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 CNN2P10-201ENST00000443067 918 ntBASIC15.21■□□□□ 0.03
PRAMEF11O60813 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF11O60813 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.21■□□□□ 0.03
PRAMEF11O60813 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms