Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX39AO00148 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
DDX39AO00148 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX39AO00148 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX39AO00148 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
DDX39AO00148 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.94■□□□□ 0.3
DDX39AO00148 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.94■□□□□ 0.3
DDX39AO00148 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
DDX39AO00148 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
DDX39AO00148 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 MIR600HG-201ENST00000449175 5984 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX39AO00148 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX39AO00148 Z93015.1-201ENST00000451718 390 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 MESTP3-201ENST00000503460 968 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
DDX39AO00148 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
DDX39AO00148 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
DDX39AO00148 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX39AO00148 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.93■□□□□ 0.3
DDX39AO00148 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.93■□□□□ 0.3
DDX39AO00148 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.93■□□□□ 0.3
DDX39AO00148 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.93■□□□□ 0.3
DDX39AO00148 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 AGAP7P-201ENST00000582299 2062 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 AGAP14-201ENST00000624701 2060 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.93■□□□□ 0.3
DDX39AO00148 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
DDX39AO00148 ACE3P-201ENST00000423435 1973 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DDX39AO00148 AL023775.1-201ENST00000454907 1746 ntBASIC16.93■□□□□ 0.3
DDX39AO00148 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.92■□□□□ 0.3
DDX39AO00148 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 AC009093.2-202ENST00000620513 2079 ntBASIC16.92■□□□□ 0.3
DDX39AO00148 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 AC011840.2-201ENST00000563063 1520 ntBASIC16.92■□□□□ 0.3
DDX39AO00148 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.92■□□□□ 0.3
DDX39AO00148 GOLGA2P4-201ENST00000441462 777 ntBASIC16.92■□□□□ 0.3
DDX39AO00148 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.92■□□□□ 0.3
DDX39AO00148 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 MIR4683-201ENST00000579659 81 ntBASIC16.92■□□□□ 0.3
DDX39AO00148 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.92■□□□□ 0.3
DDX39AO00148 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX39AO00148 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX39AO00148 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
DDX39AO00148 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
DDX39AO00148 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX39AO00148 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms