Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 MIR5100-201ENST00000579544 119 ntBASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AC023794.5-201ENST00000564380 2157 ntBASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC9.58□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 KRT18P1-202ENST00000452408 1331 ntBASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 KRT8P37-201ENST00000451609 1420 ntBASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AC131902.2-201ENST00000566892 2172 ntBASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 TSN-212ENST00000536142 3328 ntTSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AC006557.2-201ENST00000592985 1240 ntBASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AL078644.1-201ENST00000609881 752 ntBASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 AGGF1P1-201ENST00000509500 2073 ntBASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TMEM256-PLSCR3K7ERE1 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms