Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 RN7SKP214-201ENST00000364208 315 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 RNA5SP423-201ENST00000517127 109 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AC024681.1-201ENST00000521917 487 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AC005962.1-201ENST00000584100 773 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AL157791.1-201ENST00000553667 1699 ntBASIC13.11□□□□□ -0.31
MBD3L3A6NE82 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.11□□□□□ -0.31
MBD3L3A6NE82 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AC105917.1-201ENST00000506637 2539 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AC008132.1-202ENST00000342005 1389 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ACTG1P2-201ENST00000415776 1125 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ACTG1P11-201ENST00000425411 1125 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AL645933.1-201ENST00000440087 609 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 RN7SL769P-201ENST00000469386 295 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 RCC2P8-201ENST00000502779 1035 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AC105129.2-201ENST00000559536 390 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 AC097724.1-201ENST00000609581 426 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 MRPL37P1-201ENST00000592451 1337 ntBASIC13.1□□□□□ -0.31
MBD3L3A6NE82 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MBD3L3A6NE82 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MBD3L3A6NE82 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms