Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL139400.1-201ENST00000366220 510 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 DNAJB3-202ENST00000449667 1266 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 TPT1P11-201ENST00000458482 498 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 MEIS3P1-201ENST00000495167 958 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL158211.3-201ENST00000607385 239 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL844908.2-201ENST00000609461 460 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL158212.4-201ENST00000624062 1286 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AC079781.4-201ENST00000641908 219 ntBASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC00959A0A1B0GUT2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 AC055811.4-201ENST00000624039 1754 ntBASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00959A0A1B0GUT2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms