Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 HLA-J-204ENST00000495278 958 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 FLJ16779-201ENST00000612722 7638 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AC012508.2-201ENST00000567613 1472 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 INE2-201ENST00000630399 1874 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 HYMAI-201ENST00000635591 3347 ntBASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC187A0A096LP49 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 CEP164P1-201ENST00000455142 418 ntBASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 POU5F1P2-201ENST00000521750 823 ntBASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 AC242376.1-201ENST00000559033 726 ntBASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 AC009884.2-201ENST00000603110 324 ntBASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC187A0A096LP49 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC187A0A096LP49 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 AC006058.4-201ENST00000624016 1670 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 AL138725.1-201ENST00000407347 1314 ntBASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC187A0A096LP49 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms