Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AC104457.1-201ENST00000401024 814 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 BCRP1-201ENST00000444246 691 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 GNAQP1-201ENST00000444815 1067 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SERBP1P5-201ENST00000510079 1181 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AC104596.2-201ENST00000512793 793 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AL049840.4-201ENST00000602422 811 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AC004233.3-201ENST00000607794 1269 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AC012508.2-201ENST00000567613 1472 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 FGD5P1-202ENST00000614866 2498 ntBASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AC004066.1-201ENST00000502488 802 ntBASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AL355385.1-201ENST00000606123 409 ntBASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AC093726.1-201ENST00000608064 963 ntBASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DRB4X5D2U9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DRB4X5D2U9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms