Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 AP001282.1-201ENST00000531301 1499 ntBASIC12.85□□□□□ -0.35
UBQLN2Q9UHD9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AC055811.4-201ENST00000624039 1754 ntBASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AC073621.1-201ENST00000392730 636 ntBASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 MIR940-201ENST00000401276 94 ntBASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 PTCHD3P3-201ENST00000403073 906 ntBASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 RPL13AP23-201ENST00000480739 586 ntBASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 AC104109.2-201ENST00000602919 1418 ntBASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.84□□□□□ -0.35
UBQLN2Q9UHD9 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 PCDHA5-203ENST00000614258 4248 ntBASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.83□□□□□ -0.35
UBQLN2Q9UHD9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 AP001972.5-201ENST00000624624 2338 ntBASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.83□□□□□ -0.36
UBQLN2Q9UHD9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms